The eLignin Microbial Database

A curated resource for microbial metabolism of lignin-derived aromatic compounds

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Exophiala jeanselmei CBS 658.76

Kingdom
Fungi
Phylum
Ascomycota
Class
-
Type
Yeast
Strain
CBS 658.76
Origin (Details)
Unknown (origin of isolation not listed at ATCC)
Origin (Category)
Unknown or Not Specified
Genome Sequenced
-
Synonyms
Torula jeanselmei
Empirical Data

Utilizible (lignin-derived) carbon sources (30) Empirical

NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".

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Substrate Reference(s) Comment(s)
2-phenylethanol Middelhoven (1993) -
3-hydroxybenzoic acid Middelhoven (1993) -
3-hydroxyphenylacetic acid Middelhoven (1993) -
4-cresol Middelhoven (1993) -
4-ethylphenol Middelhoven (1993) -
4-hydroxyacetophenone Middelhoven (1993) -
4-hydroxybenzoic acid Middelhoven (1993) -
4-hydroxyphenylacetic acid Middelhoven (1993) -
5-phenylvaleric acid Middelhoven (1993) -
benzoic acid Middelhoven (1993) -
catechol Middelhoven (1993) -
ferulic acid Middelhoven (1993) -
gentisic acid Middelhoven (1993) -
hydroquinone Middelhoven (1993) -
isovanillic acid Middelhoven (1993) -
l-3-phenyllactic acid Middelhoven (1993) -
m-coumaric acid Middelhoven (1993) -
m-cresol Middelhoven (1993) -
mandelic acid Middelhoven (1993) -
orcinol Middelhoven (1993) -
p-coumaric acid Middelhoven (1993) -
phenol Middelhoven (1993) -
phenylacetic acid Middelhoven (1993) -
phenylpyruvic acid Middelhoven (1993) -
phloroglucinol Middelhoven (1993) -
protocatechuic acid Middelhoven (1993) -
resorcinol Middelhoven (1993) -
salicylic acid Middelhoven (1993) -
syringic acid Middelhoven (1993) -
vanillic acid Middelhoven (1993) -

Pathways (0) Empirical

No pathways listed for this organism.

Enzymes (0) Empirical

No enzymes listed for this organism.

Transporters (0) Empirical

No transporters listed for this organism.

Genes (0) Empirical

No genes listed for this organism.

Predicted Relationships Hide predicted
The sections below contain relationships inferred from the empirical data above. They are computationally predicted and have not been independently verified. Learn more about data assumptions →
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Predicted pathways in Exophiala jeanselmei CBS 658.76 Predicted

Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?

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Predicted pathway Funneling branch Inferred via substrate Reference
benzoic acid benzoyl branch benzoic acid Middelhoven (1993)
beta-ketoadipate (all branches) beta-ketoadipate branch catechol, protocatechuic acid Middelhoven (1993)
beta-ketoadipate: Catechol branch beta-ketoadipate branch catechol Middelhoven (1993)
beta-ketoadipate: Protocatechuate branch beta-ketoadipate branch protocatechuic acid Middelhoven (1993)
catechol meta-cleavage catechol meta-cleavage branch catechol Middelhoven (1993)
ferulic acid coniferyl branch ferulic acid Middelhoven (1993)
gentisate-cleavage gentisate branch gentisic acid Middelhoven (1993)
guaiacol coniferyl branch vanillic acid Middelhoven (1993)
m-cresol gentisate branch 3-hydroxybenzoic acid Middelhoven (1993)
p-coumaric acid p-coumaric branch 4-hydroxybenzoic acid, p-coumaric acid Middelhoven (1993)
p-cresol p-coumaric branch 4-cresol Middelhoven (1993)
phenol phenol branch phenol Middelhoven (1993)
protocatechuate 2,3-cleavage protocatechuate 2,3-cleavage branch protocatechuic acid Middelhoven (1993)
protocatechuate 4,5-cleavage beta-ketoadipate branch protocatechuic acid Middelhoven (1993)
resorcinol resorcinol branch resorcinol Middelhoven (1993)
salicylic acid I benzoyl branch salicylic acid Middelhoven (1993)
salicylic acid II gentisate branch salicylic acid Middelhoven (1993)
syringic acid I sinapyl branch syringic acid Middelhoven (1993)
syringic acid II sinapyl branch syringic acid Middelhoven (1993)
syringic acid III sinapyl branch syringic acid Middelhoven (1993)
vanillin I coniferyl branch vanillic acid Middelhoven (1993)
vanillin II coniferyl branch vanillic acid Middelhoven (1993)

Predicted enzymes in Exophiala jeanselmei CBS 658.76 Predicted

Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?

No enzymes predicted from confirmed pathways for this organism.

Culture Collections

Strain Depository ID
CBS 658.76 CBS 658.76

Genome Sequencing

No genome sequencing information available for this organism.

Other Databases

Database Comment
NCBI Taxonomy Taxonomy database

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