The eLignin Microbial Database

A curated resource for microbial metabolism of lignin-derived aromatic compounds

brinkdp/eLignin 0 0

Pathways

Schematic overview of the aromatic catabolic pathways in eLignin. Click any pathway box to open its detail page.
For the legacy static image used in the original publication, click here.
(NB: Not all organisms have all of these pathways.)

Funneling pathway   Fission pathway   Central metabolite




Showing all 26 pathways.

Type Name Branch
Funneling benzoic acid pathway benzoyl branch
Fission beta-ketoadipate (all branches) pathway beta-ketoadipate branch
Fission beta-ketoadipate: Catechol branch pathway beta-ketoadipate branch
Fission beta-ketoadipate: Protocatechuate branch pathway beta-ketoadipate branch
Fission beta-ketoadipate: lower branch pathway beta-ketoadipate branch
Funneling caffeic acid pathway caffeic acid branch
Fission catechol meta-cleavage pathway catechol meta-cleavage branch
Funneling coniferyl alcohol pathway coniferyl branch
Funneling ferulic acid pathway coniferyl branch
Fission gentisate-cleavage pathway gentisate branch
Funneling guaiacol pathway coniferyl branch
Funneling m-cresol pathway gentisate branch
Funneling p-coumaric acid pathway p-coumaric branch
Funneling p-cresol pathway p-coumaric branch
Funneling phenol pathway phenol branch
Fission protocatechuate 2,3-cleavage pathway protocatechuate 2,3-cleavage branch
Fission protocatechuate 4,5-cleavage pathway beta-ketoadipate branch
Funneling resorcinol pathway resorcinol branch
Funneling salicylic acid I pathway benzoyl branch
Funneling salicylic acid II pathway gentisate branch
Funneling sinapic acid pathway sinapyl branch
Fission syringic acid I pathway sinapyl branch
Fission syringic acid II pathway sinapyl branch
Fission syringic acid III pathway sinapyl branch
Funneling vanillin I pathway coniferyl branch
Funneling vanillin II pathway coniferyl branch