The eLignin Microbial Database

A curated resource for microbial metabolism of lignin-derived aromatic compounds

brinkdp/eLignin 0 0

Funneling pathway: salicylic acid I

Full Name
salicylic acid I
Funneling Branch
benzoyl branch

Pathway Network Visualization 📥 Export BioPAX JSON-LD

Interactive metabolic pathway map showing compounds (text labels) connected by reaction arrows. Click arrows to view reaction details, click compounds to view substrate details. Zoom with mouse wheel, pan by dragging.

Empirical Data

Organisms with this Pathway Empirical

📥 Download as TSV
Organism Strain Reference(s)
Pseudomonas sp. MT1 Cámara et al (2007)
Predicted Relationships Hide predicted
The sections below contain relationships inferred from the empirical data above. They are computationally predicted and have not been independently verified. Learn more about data assumptions →
Predicted sections are hidden. Show them

Organisms predicted for this pathway Predicted

Inferred from reported substrate utilization: organisms that can utilise a compound entering this pathway as a reactant are predicted to carry the pathway, unless already confirmed. The reference confirming substrate use is shown. Not experimentally verified. What does this mean?

📥 Download as TSV
Predicted organism Strain Inferred via substrate Reference
Acetobacterium woodii NZva16 salicylic acid Bache et al (1981)
Burkholderia cepacia ATCC 29351 salicylic acid Hamzah et al (1994)
Burkholderia cepacia KK01 salicylic acid Kato et al (1998)
Burkholderia cepacia Song isolate 1 salicylic acid Song (2009)
Cryptococcus terreus PB4 salicylic acid Bergauer et al (2005)
Cupriavidus pinatubonensis 1245 salicylic acid Sato et al (2006)
Desulfobacterium phenolicum Ph01 salicylic acid Bak et al (1986)
Exophiala jeanselmei CBS 658.76 salicylic acid Middelhoven (1993)
Leucosporidium scottii G43 salicylic acid Middelhoven (1993)
Pantoea dispersa Song isolate 2 salicylic acid Song (2009)
Rhodococcus fascians AY730713 salicylic acid Song (2009)
Rhodococcus fascians Song isolate 3 salicylic acid Song (2009)
Rhodococcus rhodochrous 116 salicylic acid Karlson et al (1993)
Rhodotorula creatinivora PB7 salicylic acid Bergauer et al (2005)
Rhodotorula graminis WP1 salicylic acid Durham et al (1984)
Rhodotorula ingeniosa PB5 salicylic acid Bergauer et al (2005)
Streptomyces sp. WA46 salicylic acid Ishiyama et al (2004)
Thauera aromatica K172 salicylic acid Mechichi et al (2002)

Predicted enzyme assignments for confirmed organisms Predicted

Inferred from confirmed pathway membership: if an organism is confirmed to carry this pathway, enzymes known to catalyse reactions within it are predicted to be present. The reference confirming the organism’s membership of this pathway is shown. Not experimentally verified. What does this mean?

No predicted enzyme assignments: all confirmed organisms are already linked to the enzymes of this pathway.

Reactions in this Pathway

📥 Download as TSV
Order Substrates Products Enzyme(s) Reaction
1 salicylic acid → catechol salicylate 1-hydroxylase R00058

Compounds (Substrates & Products)

Intermediate metabolites that are not registered in the Substrate table are shown as plain text without a hyperlink.

Compound Name Formula SMILES PubChem Role
salicylic acid C7H6O3 C1=CC=C(C(=C1)C(=O)O)O 338 substrate
catechol C6H6O2 C1=CC=C(C(=C1)O)O 289 product

Connected Pathways

Outgoing Connections (This pathway connects to:)

Connected Pathway Connecting Compound
Fission pathway: beta-ketoadipate: Catechol branch catechol
Fission pathway: catechol meta-cleavage catechol

Genes

Gene Enzyme
Psmt1_salA salicylate 1-hydroxylase

Other Databases

Database Comment
MetaCyc Metabolic pathway database

← Back to Pathways List