The eLignin Microbial Database

A curated resource for microbial metabolism of lignin-derived aromatic compounds

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Burkholderia cepacia ATCC 29351

Kingdom
Bacteria
Phylum
Proteobacteria
Class
Beta-proteobacteria
Type
Gram negative
Strain
ATCC 29351
Origin (Details)
Garden soil
Origin (Category)
Soil
Genome Sequenced
-
Synonyms
Pseudomonas cepacia
Pseudomonas multivorans
Pseudomonas kingii
Empirical Data

Utilizible (lignin-derived) carbon sources (2) Empirical

NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".

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Substrate Reference(s) Comment(s)
benzoic acid Hamzah et al (1994) -
salicylic acid Hamzah et al (1994) -

Pathways (2) Empirical

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Pathway Name Reference(s)
beta-ketoadipate: Catechol branch Hamzah et al (1994)
catechol meta-cleavage Hamzah et al (1994)

Enzymes (0) Empirical

No enzymes listed for this organism.

Transporters (0) Empirical

No transporters listed for this organism.

Genes (0) Empirical

No genes listed for this organism.

Predicted Relationships Hide predicted
The sections below contain relationships inferred from the empirical data above. They are computationally predicted and have not been independently verified. Learn more about data assumptions →
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Predicted pathways in Burkholderia cepacia ATCC 29351 Predicted

Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?

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Predicted pathway Funneling branch Inferred via substrate Reference
benzoic acid benzoyl branch benzoic acid Hamzah et al (1994)
salicylic acid I benzoyl branch salicylic acid Hamzah et al (1994)
salicylic acid II gentisate branch salicylic acid Hamzah et al (1994)

Predicted enzymes in Burkholderia cepacia ATCC 29351 Predicted

Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?

Predicted enzyme Inferred via pathway Reference
2-hydroxymuconate-6-semialdehyde hydrolase catechol meta-cleavage Hamzah et al (1994)
2-oxopent-4-enoate hydratase catechol meta-cleavage Hamzah et al (1994)
4-hydroxy-2-oxovalerate aldolase catechol meta-cleavage Hamzah et al (1994)
catechol 1,2-dioxygenase beta-ketoadipate: Catechol branch Hamzah et al (1994)
catechol 2,3-dioxygenase catechol meta-cleavage Hamzah et al (1994)
muconate cycloisomerase beta-ketoadipate: Catechol branch Hamzah et al (1994)
muconolactone isomerase beta-ketoadipate: Catechol branch Hamzah et al (1994)

Culture Collections

Strain Depository ID
ATCC 29351 ATCC 29351

Genome Sequencing

No genome sequencing information available for this organism.

Other Databases

Database Comment
NCBI Taxonomy Taxonomy database

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