The eLignin Microbial Database

A curated resource for microbial metabolism of lignin-derived aromatic compounds

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Thauera aromatica K172

Kingdom
Bacteria
Phylum
Proteobacteria
Class
Beta-proteobacteria
Type
Gram negative
Strain
K172
Origin (Details)
Anaerobic sludge from the municipal sewage plant in Konstanz, Germany
Origin (Category)
Wastewater sludge
Genome Sequenced
-
Empirical Data

Utilizible (lignin-derived) carbon sources (16) Empirical

NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".

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Substrate Reference(s) Comment(s)
2,4-dihydroxybenzoic acid Tschech et al (1987) (anaerobically)
2,6-dihydroxybenzoic acid (intermediate) Tschech et al (1987) (anaerobically)
3-hydroxybenzoic acid Mechichi et al (2002) (anaerobically)
4-cresol Tschech et al (1987) (anaerobically)
4-hydroxybenzaldehyde Tschech et al (1987) (anaerobically)
4-hydroxybenzoic acid Tschech et al (1987) (anaerobically)
4-hydroxyphenylacetic acid Mechichi et al (2002) (anaerobically)
benzaldehyde Tschech et al (1987) (anaerobically)
benzoic acid Tschech et al (1987) (aerobically & anaerobically)
benzyl alcohol Tschech et al (1987) (anaerobically)
cinnamic acid Tschech et al (1987) (anaerobically)
phenol Tschech et al (1987) (anaerobically)
phenylacetic acid Tschech et al (1987) (anaerobically)
protocatechuic acid Mechichi et al (2002) (anaerobically)
resorcinol Tschech et al (1987) (anaerobically)
salicylic acid Mechichi et al (2002) (anaerobically)

Pathways (0) Empirical

No pathways listed for this organism.

Enzymes (0) Empirical

No enzymes listed for this organism.

Transporters (0) Empirical

No transporters listed for this organism.

Genes (0) Empirical

No genes listed for this organism.

Predicted Relationships Hide predicted
The sections below contain relationships inferred from the empirical data above. They are computationally predicted and have not been independently verified. Learn more about data assumptions →
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Predicted pathways in Thauera aromatica K172 Predicted

Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?

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Predicted pathway Funneling branch Inferred via substrate Reference
benzoic acid benzoyl branch benzoic acid Tschech et al (1987)
beta-ketoadipate (all branches) beta-ketoadipate branch protocatechuic acid Mechichi et al (2002)
beta-ketoadipate: Protocatechuate branch beta-ketoadipate branch protocatechuic acid Mechichi et al (2002)
m-cresol gentisate branch 3-hydroxybenzoic acid Mechichi et al (2002)
p-coumaric acid p-coumaric branch 4-hydroxybenzaldehyde, 4-hydroxybenzoic acid Tschech et al (1987)
p-cresol p-coumaric branch 4-cresol Tschech et al (1987)
phenol phenol branch phenol Tschech et al (1987)
protocatechuate 2,3-cleavage protocatechuate 2,3-cleavage branch protocatechuic acid Mechichi et al (2002)
protocatechuate 4,5-cleavage beta-ketoadipate branch protocatechuic acid Mechichi et al (2002)
resorcinol resorcinol branch resorcinol Tschech et al (1987)
salicylic acid I benzoyl branch salicylic acid Mechichi et al (2002)
salicylic acid II gentisate branch salicylic acid Mechichi et al (2002)

Predicted enzymes in Thauera aromatica K172 Predicted

Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?

No enzymes predicted from confirmed pathways for this organism.

Culture Collections

No culture collection information available for this organism.

Genome Sequencing

No genome sequencing information available for this organism.

Other Databases

Database Comment
NCBI Taxonomy Taxonomy database

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