Pseudomonas sp. MT1
- Kingdom
- Bacteria
- Phylum
- Proteobacteria
- Class
- Gamma-proteobacteria
- Type
- Gram negative
- Strain
- MT1
- Origin (Details)
- Sediment from Elbe River, Germany
- Origin (Category)
- Sediment
- Genome Sequenced
- -
Utilizible (lignin-derived) carbon sources (2) Empirical
NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".
| Substrate | Reference(s) | Comment(s) |
|---|---|---|
| catechol | Pelz et al (1999) | - |
| dehydropolymerisate (dhp) |
Nikodem et al (2003) Pelz et al (1999) |
- |
Pathways (1) Empirical
| Pathway Name | Reference(s) |
|---|---|
| salicylic acid I | Cámara et al (2007) |
Transporters (0) Empirical
No transporters listed for this organism.
Predicted pathways in Pseudomonas sp. MT1 Predicted
Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?
| Predicted pathway | Funneling branch | Inferred via substrate | Reference |
|---|---|---|---|
| beta-ketoadipate (all branches) | beta-ketoadipate branch | catechol | Pelz et al (1999) |
| beta-ketoadipate: Catechol branch | beta-ketoadipate branch | catechol | Pelz et al (1999) |
| catechol meta-cleavage | catechol meta-cleavage branch | catechol | Pelz et al (1999) |
Predicted enzymes in Pseudomonas sp. MT1 Predicted
Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?
No enzymes predicted from confirmed pathways for this organism.
Culture Collections
No culture collection information available for this organism.
Genome Sequencing
No genome sequencing information available for this organism.
Other Databases
| Database | Comment |
|---|---|
| NCBI Taxonomy | Taxonomy database |