The eLignin Microbial Database

A curated resource for microbial metabolism of lignin-derived aromatic compounds

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Trichosporon cutaneum CBS2466

Kingdom
Fungi
Phylum
Basidiomycota
Class
-
Type
Yeast (oleaginous)
Strain
CBS2466
Origin (Details)
Probably from human clinical specimen (According to ATCC strain)28592
Origin (Category)
Clinical isolate
Genome Sequenced
Yes; strain ACCC 20271
Synonyms
Cutaneotrichosporon cutaneum
Empirical Data

Utilizible (lignin-derived) carbon sources (8) Empirical

NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".

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Substrate Reference(s) Comment(s)
3-hydroxybenzoic acid Middelhoven (1993) -
4-hydroxybenzoic acid Middelhoven (1993) -
benzoic acid Middelhoven (1993) -
catechol Middelhoven (1993) -
hydroquinone Middelhoven (1993) -
phenol Middelhoven (1993) -
phloroglucinol Middelhoven (1993) -
protocatechuic acid Middelhoven (1993) -

Pathways (1) Empirical

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Pathway Name Reference(s)
beta-ketoadipate (all branches) Anderson et al (1980)

Enzymes (0) Empirical

No enzymes listed for this organism.

Transporters (0) Empirical

No transporters listed for this organism.

Genes (0) Empirical

No genes listed for this organism.

Predicted Relationships Hide predicted
The sections below contain relationships inferred from the empirical data above. They are computationally predicted and have not been independently verified. Learn more about data assumptions →
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Predicted pathways in Trichosporon cutaneum CBS2466 Predicted

Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?

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Predicted pathway Funneling branch Inferred via substrate Reference
benzoic acid benzoyl branch benzoic acid Middelhoven (1993)
beta-ketoadipate: Catechol branch beta-ketoadipate branch catechol Middelhoven (1993)
beta-ketoadipate: Protocatechuate branch beta-ketoadipate branch protocatechuic acid Middelhoven (1993)
catechol meta-cleavage catechol meta-cleavage branch catechol Middelhoven (1993)
m-cresol gentisate branch 3-hydroxybenzoic acid Middelhoven (1993)
p-coumaric acid p-coumaric branch 4-hydroxybenzoic acid Middelhoven (1993)
phenol phenol branch phenol Middelhoven (1993)
protocatechuate 2,3-cleavage protocatechuate 2,3-cleavage branch protocatechuic acid Middelhoven (1993)
protocatechuate 4,5-cleavage beta-ketoadipate branch protocatechuic acid Middelhoven (1993)

Predicted enzymes in Trichosporon cutaneum CBS2466 Predicted

Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?

Predicted enzyme Inferred via pathway Reference
3-carboxy-cis,cis-muconate cycloisomerase beta-ketoadipate (all branches) Anderson et al (1980)
3-oxoadipate enol-lactonase beta-ketoadipate (all branches) Anderson et al (1980)
4-carboxymuconolactone decarboxylase beta-ketoadipate (all branches) Anderson et al (1980)
Protocatechuate 3,4-dioxygenase beta-ketoadipate (all branches) Anderson et al (1980)
catechol 1,2-dioxygenase beta-ketoadipate (all branches) Anderson et al (1980)
muconate cycloisomerase beta-ketoadipate (all branches) Anderson et al (1980)
muconolactone isomerase beta-ketoadipate (all branches) Anderson et al (1980)

Culture Collections

Strain Depository ID
CBS2466 CBS2466

Genome Sequencing

Strain Status Reference
CBS2466 Yes; strain ACCC 20271 Wang et al (2016)

Other Databases

No external database links are available for this organism.

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