Cupriavidus laharis 1263a
- Kingdom
- Bacteria
- Phylum
- Proteobacteria
- Class
- Beta-proteobacteria
- Type
- Gram negative
- Strain
- 1263a
- Origin (Details)
- Volcanic mudflow deposits sampled around Mt. Pinatubo, the Philippines
- Origin (Category)
- Soil
- Genome Sequenced
- -
Utilizible (lignin-derived) carbon sources (4) Empirical
NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".
| Substrate | Reference(s) | Comment(s) |
|---|---|---|
| caffeic acid | Sato et al (2006) | - |
| catechol | Sato et al (2006) | - |
| phenol | Sato et al (2006) | - |
| vanillic acid | Sato et al (2006) | - |
Pathways (0) Empirical
No pathways listed for this organism.
Enzymes (0) Empirical
No enzymes listed for this organism.
Transporters (0) Empirical
No transporters listed for this organism.
Genes (0) Empirical
No genes listed for this organism.
Predicted pathways in Cupriavidus laharis 1263a Predicted
Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?
| Predicted pathway | Funneling branch | Inferred via substrate | Reference |
|---|---|---|---|
| beta-ketoadipate (all branches) | beta-ketoadipate branch | catechol | Sato et al (2006) |
| beta-ketoadipate: Catechol branch | beta-ketoadipate branch | catechol | Sato et al (2006) |
| caffeic acid | caffeic acid branch | caffeic acid | Sato et al (2006) |
| catechol meta-cleavage | catechol meta-cleavage branch | catechol | Sato et al (2006) |
| guaiacol | coniferyl branch | vanillic acid | Sato et al (2006) |
| phenol | phenol branch | phenol | Sato et al (2006) |
| vanillin I | coniferyl branch | vanillic acid | Sato et al (2006) |
| vanillin II | coniferyl branch | vanillic acid | Sato et al (2006) |
Predicted enzymes in Cupriavidus laharis 1263a Predicted
Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?
No enzymes predicted from confirmed pathways for this organism.
Culture Collections
No culture collection information available for this organism.
Genome Sequencing
No genome sequencing information available for this organism.
Other Databases
| Database | Comment |
|---|---|
| NCBI Taxonomy | Taxonomy database |