Rhodococcus erythropolis TA421
- Kingdom
- Bacteria
- Phylum
- Actinobacteria
- Class
- -
- Type
- Gram positive
- Strain
- TA421
- Origin (Details)
- Termite gut (<i>Reticulitermes speratus</i>)
- Origin (Category)
- Termite gut
- Genome Sequenced
- -
Utilizible (lignin-derived) carbon sources (6) Empirical
NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".
| Substrate | Reference(s) | Comment(s) |
|---|---|---|
| 4-hydroxybenzoic acid | Chung et al (1994) | - |
| benzoic acid | Chung et al (1994) | - |
| biphenyl | Chung et al (1994) | - |
| catechol | Chung et al (1994) | - |
| phenol | Chung et al (1994) | - |
| protocatechuic acid | Chung et al (1994) | - |
Pathways (0) Empirical
No pathways listed for this organism.
Enzymes (0) Empirical
No enzymes listed for this organism.
Transporters (0) Empirical
No transporters listed for this organism.
Genes (0) Empirical
No genes listed for this organism.
Predicted pathways in Rhodococcus erythropolis TA421 Predicted
Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?
| Predicted pathway | Funneling branch | Inferred via substrate | Reference |
|---|---|---|---|
| benzoic acid | benzoyl branch | benzoic acid | Chung et al (1994) |
| beta-ketoadipate (all branches) | beta-ketoadipate branch | catechol, protocatechuic acid | Chung et al (1994) |
| beta-ketoadipate: Catechol branch | beta-ketoadipate branch | catechol | Chung et al (1994) |
| beta-ketoadipate: Protocatechuate branch | beta-ketoadipate branch | protocatechuic acid | Chung et al (1994) |
| catechol meta-cleavage | catechol meta-cleavage branch | catechol | Chung et al (1994) |
| p-coumaric acid | p-coumaric branch | 4-hydroxybenzoic acid | Chung et al (1994) |
| phenol | phenol branch | phenol | Chung et al (1994) |
| protocatechuate 2,3-cleavage | protocatechuate 2,3-cleavage branch | protocatechuic acid | Chung et al (1994) |
| protocatechuate 4,5-cleavage | beta-ketoadipate branch | protocatechuic acid | Chung et al (1994) |
Predicted enzymes in Rhodococcus erythropolis TA421 Predicted
Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?
No enzymes predicted from confirmed pathways for this organism.
Culture Collections
No culture collection information available for this organism.
Genome Sequencing
No genome sequencing information available for this organism.
Other Databases
| Database | Comment |
|---|---|
| NCBI Taxonomy | Taxonomy database |