Comamonas sp. B-9 (CGMCC No. 4251)
- Kingdom
- Bacteria
- Phylum
- Proteobacteria
- Class
- Beta-proteobacteria
- Type
- Gram negative
- Strain
- B-9 (CGMCC No. 4251)
- Origin (Details)
- Steeping fluid of eroded bamboo slips
- Origin (Category)
- Forest and wood samples
- Genome Sequenced
- -
Utilizible (lignin-derived) carbon sources (8) Empirical
NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".
| Substrate | Reference(s) | Comment(s) |
|---|---|---|
| cinnamic acid | Chen et al (2012) | - |
| ferulic acid | Chen et al (2012) | - |
| guaiacol | Chen et al (2012) | - |
| kraft lignin | Chen et al (2012) | - |
| p-coumaric acid | Chen et al (2012) | - |
| sinapic acid | Chen et al (2012) | - |
| vanillic acid | Chen et al (2012) | - |
| veratric acid | Chen et al (2012) | - |
Pathways (0) Empirical
No pathways listed for this organism.
Enzymes (0) Empirical
No enzymes listed for this organism.
Transporters (0) Empirical
No transporters listed for this organism.
Genes (0) Empirical
No genes listed for this organism.
Predicted pathways in Comamonas sp. B-9 (CGMCC No. 4251) Predicted
Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?
| Predicted pathway | Funneling branch | Inferred via substrate | Reference |
|---|---|---|---|
| ferulic acid | coniferyl branch | ferulic acid | Chen et al (2012) |
| guaiacol | coniferyl branch | guaiacol, vanillic acid | Chen et al (2012) |
| p-coumaric acid | p-coumaric branch | p-coumaric acid | Chen et al (2012) |
| sinapic acid | sinapyl branch | sinapic acid | Chen et al (2012) |
| vanillin I | coniferyl branch | vanillic acid | Chen et al (2012) |
| vanillin II | coniferyl branch | vanillic acid | Chen et al (2012) |
Predicted enzymes in Comamonas sp. B-9 (CGMCC No. 4251) Predicted
Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?
No enzymes predicted from confirmed pathways for this organism.
Culture Collections
No culture collection information available for this organism.
Genome Sequencing
No genome sequencing information available for this organism.
Other Databases
| Database | Comment |
|---|---|
| NCBI Taxonomy | Taxonomy database |