Sphingomonas aromaticivorans F199
- Kingdom
- Bacteria
- Phylum
- Proteobacteria
- Class
- Alpha-proteobacteria
- Type
- Gram negative
- Strain
- F199
- Origin (Details)
- Deep-Terrestrial-Subsurface Sediments
- Origin (Category)
- Caves and mines
- Genome Sequenced
- -
Utilizible (lignin-derived) carbon sources (7) Empirical
NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".
| Substrate | Reference(s) | Comment(s) |
|---|---|---|
| 4-cresol | BALKWILL et al (1997) | - |
| 4-hydroxybenzoic acid | Cecil et al (2018) | - |
| benzoic acid | BALKWILL et al (1997) | - |
| ferulic acid | Cecil et al (2018) | - |
| m-xylene | BALKWILL et al (1997) | - |
| naphthalene | BALKWILL et al (1997) | - |
| sinapic acid | Cecil et al (2018) | - |
Pathways (0) Empirical
No pathways listed for this organism.
Enzymes (0) Empirical
No enzymes listed for this organism.
Transporters (0) Empirical
No transporters listed for this organism.
Genes (0) Empirical
No genes listed for this organism.
Predicted pathways in Sphingomonas aromaticivorans F199 Predicted
Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?
| Predicted pathway | Funneling branch | Inferred via substrate | Reference |
|---|---|---|---|
| benzoic acid | benzoyl branch | benzoic acid | BALKWILL et al (1997) |
| ferulic acid | coniferyl branch | ferulic acid | Cecil et al (2018) |
| p-coumaric acid | p-coumaric branch | 4-hydroxybenzoic acid | Cecil et al (2018) |
| p-cresol | p-coumaric branch | 4-cresol | BALKWILL et al (1997) |
| sinapic acid | sinapyl branch | sinapic acid | Cecil et al (2018) |
Predicted enzymes in Sphingomonas aromaticivorans F199 Predicted
Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?
No enzymes predicted from confirmed pathways for this organism.
Culture Collections
| Strain | Depository ID |
|---|---|
| F199 | DSM 12444 |
Genome Sequencing
No genome sequencing information available for this organism.
Other Databases
| Database | Comment |
|---|---|
| NCBI Taxonomy | Taxonomy database |