Rhodosporidium toruloides IFO0880
- Kingdom
- Fungi
- Phylum
- Basidiomycota
- Class
- -
- Type
- Yeast
- Strain
- IFO0880
- Origin (Details)
- Obtained from Biological Resource Center, NITE (NBRC), Japan
- Origin (Category)
- Unknown or Not Specified
- Genome Sequenced
- -
Utilizible (lignin-derived) carbon sources (5) Empirical
NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".
| Substrate | Reference(s) | Comment(s) |
|---|---|---|
| 4-hydroxybenzoic acid | Yaegashi et al (2017) | - |
| benzoic acid | Yaegashi et al (2017) | - |
| ferulic acid | Yaegashi et al (2017) | - |
| p-coumaric acid | Yaegashi et al (2017) | - |
| vanillic acid | Yaegashi et al (2017) | - |
Pathways (0) Empirical
No pathways listed for this organism.
Enzymes (0) Empirical
No enzymes listed for this organism.
Transporters (0) Empirical
No transporters listed for this organism.
Genes (0) Empirical
No genes listed for this organism.
Predicted pathways in Rhodosporidium toruloides IFO0880 Predicted
Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?
| Predicted pathway | Funneling branch | Inferred via substrate | Reference |
|---|---|---|---|
| benzoic acid | benzoyl branch | benzoic acid | Yaegashi et al (2017) |
| ferulic acid | coniferyl branch | ferulic acid | Yaegashi et al (2017) |
| guaiacol | coniferyl branch | vanillic acid | Yaegashi et al (2017) |
| p-coumaric acid | p-coumaric branch | 4-hydroxybenzoic acid, p-coumaric acid | Yaegashi et al (2017) |
| vanillin I | coniferyl branch | vanillic acid | Yaegashi et al (2017) |
| vanillin II | coniferyl branch | vanillic acid | Yaegashi et al (2017) |
Predicted enzymes in Rhodosporidium toruloides IFO0880 Predicted
Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?
No enzymes predicted from confirmed pathways for this organism.
Culture Collections
| Strain | Depository ID |
|---|---|
| IFO0880 | NBRC 0880 (IFO 0880) |
Genome Sequencing
No genome sequencing information available for this organism.
Other Databases
| Database | Comment |
|---|---|
| NCBI Taxonomy | Taxonomy database |