The eLignin Microbial Database

A curated resource for microbial metabolism of lignin-derived aromatic compounds

brinkdp/eLignin 0 0

Mastigobasidium intermedium PB8

Kingdom
Fungi
Phylum
Basidiomycota
Class
-
Type
Fungus
Strain
PB8
Origin (Details)
Oil-shale mine
Origin (Category)
Caves and mines
Genome Sequenced
-
Synonyms
Leucosporidium intermedium
Sporobolomyces intermedius
Empirical Data

Utilizible (lignin-derived) carbon sources (4) Empirical

NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".

📥 Download as TSV
Substrate Reference(s) Comment(s)
catechol Bergauer et al (2005) -
hydroquinone Bergauer et al (2005) -
phenol Bergauer et al (2005) -
resorcinol Bergauer et al (2005) -

Pathways (0) Empirical

No pathways listed for this organism.

Enzymes (0) Empirical

No enzymes listed for this organism.

Transporters (0) Empirical

No transporters listed for this organism.

Genes (0) Empirical

No genes listed for this organism.

Predicted Relationships Hide predicted
The sections below contain relationships inferred from the empirical data above. They are computationally predicted and have not been independently verified. Learn more about data assumptions →
Predicted sections are hidden. Show them

Predicted pathways in Mastigobasidium intermedium PB8 Predicted

Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?

📥 Download as TSV
Predicted pathway Funneling branch Inferred via substrate Reference
beta-ketoadipate (all branches) beta-ketoadipate branch catechol Bergauer et al (2005)
beta-ketoadipate: Catechol branch beta-ketoadipate branch catechol Bergauer et al (2005)
catechol meta-cleavage catechol meta-cleavage branch catechol Bergauer et al (2005)
phenol phenol branch phenol Bergauer et al (2005)
resorcinol resorcinol branch resorcinol Bergauer et al (2005)

Predicted enzymes in Mastigobasidium intermedium PB8 Predicted

Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?

No enzymes predicted from confirmed pathways for this organism.

Culture Collections

No culture collection information available for this organism.

Genome Sequencing

No genome sequencing information available for this organism.

Other Databases

No external database links are available for this organism.

← Back to Organisms List