The eLignin Microbial Database

A curated resource for microbial metabolism of lignin-derived aromatic compounds

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Paenibacillus glucanolyticus SLM1

Kingdom
Bacteria
Phylum
Firmicutes
Class
-
Type
Unknown Gram stain
Strain
SLM1
Origin (Details)
Black liquor
Origin (Category)
Pulp and Paper Mill effluent
Genome Sequenced
-
Synonyms
Bacillus glucanolyticus
Empirical Data

Utilizible (lignin-derived) carbon sources (9) Empirical

NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".

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Substrate Reference(s) Comment(s)
acetovanillone Mathews et al (2014) -
anisoin Mathews et al (2014) -
benzaldehyde Mathews et al (2014) -
biochoice lignin Mathews et al (2014) -
black liquor Mathews et al (2014) -
catechol Mathews et al (2014) -
guaiacol Mathews et al (2014) -
switchgrass lignin Mathews et al (2014) -
vanillin Mathews et al (2014) -

Pathways (0) Empirical

No pathways listed for this organism.

Enzymes (0) Empirical

No enzymes listed for this organism.

Transporters (0) Empirical

No transporters listed for this organism.

Genes (0) Empirical

No genes listed for this organism.

Predicted Relationships Hide predicted
The sections below contain relationships inferred from the empirical data above. They are computationally predicted and have not been independently verified. Learn more about data assumptions →
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Predicted pathways in Paenibacillus glucanolyticus SLM1 Predicted

Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?

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Predicted pathway Funneling branch Inferred via substrate Reference
beta-ketoadipate (all branches) beta-ketoadipate branch catechol Mathews et al (2014)
beta-ketoadipate: Catechol branch beta-ketoadipate branch catechol Mathews et al (2014)
catechol meta-cleavage catechol meta-cleavage branch catechol Mathews et al (2014)
guaiacol coniferyl branch guaiacol Mathews et al (2014)
vanillin I coniferyl branch vanillin Mathews et al (2014)
vanillin II coniferyl branch vanillin Mathews et al (2014)

Predicted enzymes in Paenibacillus glucanolyticus SLM1 Predicted

Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?

No enzymes predicted from confirmed pathways for this organism.

Culture Collections

No culture collection information available for this organism.

Genome Sequencing

No genome sequencing information available for this organism.

Other Databases

Database Comment
NCBI Taxonomy Taxonomy database

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