Rhodopseudomonas palustris CGA009
- Kingdom
- Bacteria
- Phylum
- Proteobacteria
- Class
- Alpha-proteobacteria
- Type
- Gram negative
- Strain
- CGA009
- Origin (Details)
- Chloramphenicol-resistant derivative of R. palustris strain CGA001
- Origin (Category)
- Lab-made derivative
- Genome Sequenced
- Yes
Utilizible (lignin-derived) carbon sources (4) Empirical
NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".
| Substrate | Reference(s) | Comment(s) |
|---|---|---|
| caffeic acid | Salmon et al (2013) | - |
| cinnamic acid | Salmon et al (2013) | - |
| ferulic acid | Salmon et al (2013) | - |
| p-coumaric acid | Salmon et al (2013) | - |
Pathways (0) Empirical
No pathways listed for this organism.
Enzymes (0) Empirical
No enzymes listed for this organism.
Transporters (0) Empirical
No transporters listed for this organism.
Genes (0) Empirical
No genes listed for this organism.
Predicted pathways in Rhodopseudomonas palustris CGA009 Predicted
Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?
| Predicted pathway | Funneling branch | Inferred via substrate | Reference |
|---|---|---|---|
| caffeic acid | caffeic acid branch | caffeic acid | Salmon et al (2013) |
| ferulic acid | coniferyl branch | ferulic acid | Salmon et al (2013) |
| p-coumaric acid | p-coumaric branch | p-coumaric acid | Salmon et al (2013) |
Predicted enzymes in Rhodopseudomonas palustris CGA009 Predicted
Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?
No enzymes predicted from confirmed pathways for this organism.
Culture Collections
No culture collection information available for this organism.
Genome Sequencing
| Strain | Status | Reference |
|---|---|---|
| CGA009 | Yes | Larimer et al (2003) |
| CGA009 | Yes | Larimer et al (2003) |
Other Databases
| Database | Comment |
|---|---|
| NCBI Taxonomy | Taxonomy database |