The eLignin Microbial Database

A curated resource for microbial metabolism of lignin-derived aromatic compounds

brinkdp/eLignin 0 0

Aromatoleum aromaticum EbN1

Kingdom
Bacteria
Phylum
Proteobacteria
Class
Beta-proteobacteria
Type
Gram negative
Strain
EbN1
Origin (Details)
Mud samples from ditches and the Weser river in Bremen, Germany.
Origin (Category)
Sediment
Genome Sequenced
-
Empirical Data

Utilizible (lignin-derived) carbon sources (9) Empirical

NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".

📥 Download as TSV

Pathways (0) Empirical

No pathways listed for this organism.

Enzymes (0) Empirical

No enzymes listed for this organism.

Transporters (0) Empirical

No transporters listed for this organism.

Genes (0) Empirical

No genes listed for this organism.

Predicted Relationships Hide predicted
The sections below contain relationships inferred from the empirical data above. They are computationally predicted and have not been independently verified. Learn more about data assumptions →
Predicted sections are hidden. Show them

Predicted pathways in Aromatoleum aromaticum EbN1 Predicted

Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?

📥 Download as TSV
Predicted pathway Funneling branch Inferred via substrate Reference
benzoic acid benzoyl branch benzoic acid Rabus et al (1995)
p-cresol p-coumaric branch 4-cresol Wöhlbrand et al (2007)
phenol phenol branch phenol Wöhlbrand et al (2007)

Predicted enzymes in Aromatoleum aromaticum EbN1 Predicted

Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?

No enzymes predicted from confirmed pathways for this organism.

Culture Collections

No culture collection information available for this organism.

Genome Sequencing

No genome sequencing information available for this organism.

Other Databases

Database Comment
NCBI Taxonomy Taxonomy database

← Back to Organisms List