Bradyrhizobium japonicum USDA110
- Kingdom
- Bacteria
- Phylum
- Proteobacteria
- Class
- Alpha-proteobacteria
- Type
- Gram negative
- Strain
- USDA110
- Origin (Details)
- Soil
- Origin (Category)
- Soil
- Genome Sequenced
- Yes
- Synonyms
-
Rhizobium japonicum
Rhizobacterium japonicum
Utilizible (lignin-derived) carbon sources (1) Empirical
NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".
| Substrate | Reference(s) | Comment(s) |
|---|---|---|
| vanillic acid | Sudtachat et al (2009) | - |
Pathways (0) Empirical
No pathways listed for this organism.
Enzymes (0) Empirical
No enzymes listed for this organism.
Transporters (0) Empirical
No transporters listed for this organism.
Genes (0) Empirical
No genes listed for this organism.
Predicted pathways in Bradyrhizobium japonicum USDA110 Predicted
Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?
| Predicted pathway | Funneling branch | Inferred via substrate | Reference |
|---|---|---|---|
| guaiacol | coniferyl branch | vanillic acid | Sudtachat et al (2009) |
| vanillin I | coniferyl branch | vanillic acid | Sudtachat et al (2009) |
| vanillin II | coniferyl branch | vanillic acid | Sudtachat et al (2009) |
Predicted enzymes in Bradyrhizobium japonicum USDA110 Predicted
Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?
No enzymes predicted from confirmed pathways for this organism.
Culture Collections
No culture collection information available for this organism.
Genome Sequencing
| Strain | Status | Reference |
|---|---|---|
| USDA110 | Yes | Kaneko (2002) |
Other Databases
| Database | Comment |
|---|---|
| NCBI Taxonomy | Taxonomy database |