The eLignin Microbial Database

A curated resource for microbial metabolism of lignin-derived aromatic compounds

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Aspergillus nidulans FGSC A4

Kingdom
Fungi
Phylum
Ascomycota
Class
-
Type
Filamentous fungus
Strain
FGSC A4
Origin (Details)
From the culture collection of Fungal Genetics Stock Center, Kansas City
Origin (Category)
Unknown or Not Specified
Genome Sequenced
Yes
Empirical Data

Utilizible (lignin-derived) carbon sources (3) Empirical

NB! Always check the primary references for the experimental details; "utilizable" does not necessarily equal "growth-supporting".

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Substrate Reference(s) Comment(s)
3-chlorocatechol Martins et al (2014) -
4-chlorocatechol Martins et al (2014) -
benzoic acid Martins et al (2015) -

Pathways (1) Empirical

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Pathway Name Reference(s)
beta-ketoadipate (all branches) Martins et al (2015)

Enzymes (0) Empirical

No enzymes listed for this organism.

Transporters (0) Empirical

No transporters listed for this organism.

Genes (0) Empirical

No genes listed for this organism.

Predicted Relationships Hide predicted
The sections below contain relationships inferred from the empirical data above. They are computationally predicted and have not been independently verified. Learn more about data assumptions →
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Predicted pathways in Aspergillus nidulans FGSC A4 Predicted

Inferred from reported utilizable carbon sources: if the organism can utilise a compound that enters a pathway as a reactant, it may carry that pathway. Not experimentally verified. What does this mean?

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Predicted pathway Funneling branch Inferred via substrate Reference
benzoic acid benzoyl branch benzoic acid Martins et al (2015)

Predicted enzymes in Aspergillus nidulans FGSC A4 Predicted

Inferred from confirmed pathways: if the organism is confirmed to carry a pathway, enzymes known to catalyse reactions in that pathway are predicted to be present. The pathway used for each inference is shown. Not experimentally verified. What does this mean?

Predicted enzyme Inferred via pathway Reference
3-carboxy-cis,cis-muconate cycloisomerase beta-ketoadipate (all branches) Martins et al (2015)
3-oxoadipate enol-lactonase beta-ketoadipate (all branches) Martins et al (2015)
4-carboxymuconolactone decarboxylase beta-ketoadipate (all branches) Martins et al (2015)
Protocatechuate 3,4-dioxygenase beta-ketoadipate (all branches) Martins et al (2015)
catechol 1,2-dioxygenase beta-ketoadipate (all branches) Martins et al (2015)
muconate cycloisomerase beta-ketoadipate (all branches) Martins et al (2015)
muconolactone isomerase beta-ketoadipate (all branches) Martins et al (2015)

Culture Collections

No culture collection information available for this organism.

Genome Sequencing

Strain Status Reference
FGSC A4 Yes Galagan et al (2005)

Other Databases

Database Comment
GenBank Genome sequence database
Aspergillus Genome Genome sequence database
NCBI Taxonomy Taxonomy database

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