Organism	Strain	Reference(s)
Cupriavidus necator	JMP134	Pérez-Pantoja, D., De la Iglesia, R., Pieper, D. H., & González, B. (2008). Metabolic reconstruction of aromatic compounds degradation from the genome of the amazing pollutant-degrading bacteriumCupriavidus necatorJMP134. FEMS Microbiology Reviews, 32(5), 736–794. https://doi.org/10.1111/j.1574-6976.2008.00122.x
Pseudomonas putida	KT2440	Poblete-Castro, I., Becker, J., Dohnt, K., dos Santos, V. M., & Wittmann, C. (2012). Industrial biotechnology of Pseudomonas putida and related species. Applied Microbiology and Biotechnology, 93(6), 2279–2290. https://doi.org/10.1007/s00253-012-3928-0
Candida tropicalis	HP15	Krug, M., Ziegler, H., & Straube, G. (1985). Degradation of phenolic compounds by the yeast Candida tropicalis HP 15 I. Physiology of growth and substrate utilization. Journal of Basic Microbiology, 25(2), 103–110. https://doi.org/10.1002/jobm.3620250206
Rhodococcus opacus	DSM 1069	Kosa, M., & Ragauskas, A. J. (2011). Bioconversion of lignin model compounds with oleaginous Rhodococci. Applied Microbiology and Biotechnology, 93(2), 891–900. https://doi.org/10.1007/s00253-011-3743-z
Rhodococcus jostii	RHA1	McLeod, M. P., Warren, R. L., Hsiao, W. W. L., Araki, N., Myhre, M., Fernandes, C., Miyazawa, D., Wong, W., Lillquist, A. L., Wang, D., Dosanjh, M., Hara, H., Petrescu, A., Morin, R. D., Yang, G., Stott, J. M., Schein, J. E., Shin, H., Smailus, D., ... Eltis, L. D. (2006). The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse. Proceedings of the National Academy of Sciences, 103(42), 15582–15587. https://doi.org/10.1073/pnas.0607048103
Corynebacterium glutamicum	ATCC13032	Qi, S., Chaudhry, M. T., Zhang, Y., Meng, B., Huang, Y., Zhao, K., Poetsch, A., Jiang, C., Liu, S., & Liu, S. (2007). Comparative proteomes of Corynebacterium glutamicum grown on aromatic compounds revealed novel proteins involved in aromatic degradation and a clear link between aromatic catabolism and gluconeogenesis via fructose‐1,6‐bisphosphatase. PROTEOMICS, 7(20), 3775–3787. https://doi.org/10.1002/pmic.200700481
Acinetobacter baylyi	ADP1	Bleichrodt, F. S., Fischer, R., & Gerischer, U. C. (2010). The β-ketoadipate pathway of Acinetobacter baylyi undergoes carbon catabolite repression, cross-regulation and vertical regulation, and is affected by Crc. Microbiology, 156(5), 1313–1322. https://doi.org/10.1099/mic.0.037424-0
Rhodotorula mucilaginosa	CBS17	COOK, K. A., & CAIN, R. B. (1974). Regulation of Aromatic Metabolism in the Fungi: Metabolic Control of the 3-Oxoadipate Pathway in the Yeast Rhodotorula mucilaginosa. Journal of General Microbiology, 85(1), 37–50. https://doi.org/10.1099/00221287-85-1-37
Rhodotorula graminis	WP1	Durham, D. R., McNamee, C. G., & Stewart, D. B. (1984). Dissimilation of aromatic compounds in Rhodotorula graminis: biochemical characterization of pleiotropically negative mutants. Journal of Bacteriology, 160(2), 771–777. https://doi.org/10.1128/jb.160.2.771-777.1984
Streptomyces viridosporus	T7A	Davis, J. R., & Sello, J. K. (2009). Regulation of genes in Streptomyces bacteria required for catabolism of lignin-derived aromatic compounds. Applied Microbiology and Biotechnology, 86(3), 921–929. https://doi.org/10.1007/s00253-009-2358-0
Candida parapsilosis	CBS604	Holesova, Z., Jakubkova, M., Zavadiakova, I., Zeman, I., Tomaska, L., & Nosek, J. (2011). Gentisate and 3-oxoadipate pathways in the yeast Candida parapsilosis: identification and functional analysis of the genes coding for 3-hydroxybenzoate 6-hydroxylase and 4-hydroxybenzoate 1-hydroxylase. Microbiology, 157(7), 2152–2163. https://doi.org/10.1099/mic.0.048215-0
Amycolatopsis sp.	75iv2 (ATCC 39116)	Sutherland, J. B. (1986). Demethylation of Veratrole by Cytochrome P-450 in Streptomyces setonii. Applied and Environmental Microbiology, 52(1), 98–100. https://doi.org/10.1128/aem.52.1.98-100.1986
Rhodococcus fascians	AY730713	Song, Y. J. (2009). Characterization of aromatic hydrocarbon degrading bacteria isolated from pine litter.. Korean Journal of Microbiology and Biotechnology, 37, 333-339.
Achromobacter denitrificans	SP1	Benjamin, S., Kamimura, N., Takahashi, K., & Masai, E. (2016). Achromobacter denitrificans SP1 efficiently utilizes 16 phthalate diesters and their downstream products through protocatechuate 3,4-cleavage pathway. Ecotoxicology and Environmental Safety, 134, 172–178. https://doi.org/10.1016/j.ecoenv.2016.08.028
Streptomyces coelicolor	A3(2) M600	Davis, J. R., & Sello, J. K. (2009). Regulation of genes in Streptomyces bacteria required for catabolism of lignin-derived aromatic compounds. Applied Microbiology and Biotechnology, 86(3), 921–929. https://doi.org/10.1007/s00253-009-2358-0
Trichosporon cutaneum	CBS2466	Anderson, J. J., & Dagley, S. (1980). Catabolism of aromatic acids in Trichosporon cutaneum. Journal of Bacteriology, 141(2), 534–543. https://doi.org/10.1128/jb.141.2.534-543.1980
Agrobacterium tumefaciens	B6	Parke, D., & Ornston, L. N. (1986). Enzymes of the beta-ketoadipate pathway are inducible in Rhizobium and Agrobacterium spp. and constitutive in Bradyrhizobium spp. Journal of Bacteriology, 165(1), 288–292. https://doi.org/10.1128/jb.165.1.288-292.1986
Aspergillus nidulans	FGSC A4	Martins, T. M., Hartmann, D. O., Planchon, S., Martins, I., Renaut, J., & Silva Pereira, C. (2015). The old 3-oxoadipate pathway revisited: New insights in the catabolism of aromatics in the saprophytic fungus Aspergillus nidulans. Fungal Genetics and Biology, 74, 32–44. https://doi.org/10.1016/j.fgb.2014.11.002
Fusarium oxysporum	4287	Michielse, C. B., Reijnen, L., Olivain, C., Alabouvette, C., & Rep, M. (2012). Degradation of aromatic compounds through the β‐ketoadipate pathway is required for pathogenicity of the tomato wilt pathogen <scp>F</scp> usarium oxysporum f. sp. lycopersici. Molecular Plant Pathology, 13(9), 1089–1100. https://doi.org/10.1111/j.1364-3703.2012.00818.x
Trametes versicolor	Strain 1	Alexieva, Z., Yemendzhiev, H., & Zlateva, P. (2010). Cresols utilization by Trametes versicolor and substrate interactions in the mixture with phenol. Biodegradation, 21(4), 625–635. https://doi.org/10.1007/s10532-010-9330-7
Pseudomonas fluorescens	AN103	Narbad, A., & Gasson, M. J. (1998). Metabolism of ferulic acid via vanillin using a novel CoA-dependent pathway in a newly-isolated strain of Pseudomonas fluorescens. Microbiology, 144(5), 1397–1405. https://doi.org/10.1099/00221287-144-5-1397
Pseudomonas stutzeri	A1501	Li, D., Yan, Y., Ping, S., Chen, M., Zhang, W., Li, L., Lin, W., Geng, L., Liu, W., Lu, W., & Lin, M. (2010). Genome-wide investigation and functional characterization of the β-ketoadipate pathway in the nitrogen-fixing and root-associated bacterium Pseudomonas stutzeriA1501. BMC Microbiology, 10(1). https://doi.org/10.1186/1471-2180-10-36
Cupriavidus basilensis	B-8	Shi, Y., Chai, L., Tang, C., Yang, Z., Zhang, H., Chen, R., Chen, Y., & Zheng, Y. (2013). Characterization and genomic analysis of kraft lignin biodegradation by the beta-proteobacterium Cupriavidus basilensis B-8. Biotechnology for Biofuels, 6(1). https://doi.org/10.1186/1754-6834-6-1
Acinetobacter radioresistens	S13	Mazzoli, R., Pessione, E., Giuffrida, M. G., Fattori, P., Barello, C., Giunta, C., & Lindley, N. D. (2007). Degradation of aromatic compounds by Acinetobacter radioresistens S13: growth characteristics on single substrates and mixtures. Archives of Microbiology, 188(1), 55–68. https://doi.org/10.1007/s00203-007-0223-z
Pseudomonas putida	PRS2000	Ornston, L. N., & Parke, D. (1976). Properties of an inducible uptake system for beta-ketoadipate in Pseudomonas putida. Journal of Bacteriology, 125(2), 475–488. https://doi.org/10.1128/jb.125.2.475-488.1976
Rhodococcus opacus	PD630 (DSMZ 44193)	Henson, W. R., Campbell, T., DeLorenzo, D. M., Gao, Y., Berla, B., Kim, S. J., Foston, M., Moon, T. S., & Dantas, G. (2018). Multi-omic elucidation of aromatic catabolism in adaptively evolved Rhodococcus opacus. Metabolic Engineering, 49, 69–83. https://doi.org/10.1016/j.ymben.2018.06.009
Natrialba sp.	C21	Khemili-Talbi, S., Kebbouche-Gana, S., Akmoussi-Toumi, S., Angar, Y., & Gana, M. L. (2015). Isolation of an extremely halophilic arhaeon Natrialba sp. C21 able to degrade aromatic compounds and to produce stable biosurfactant at high salinity. Extremophiles, 19(6), 1109–1120. https://doi.org/10.1007/s00792-015-0783-9