Fission pathway: beta-ketoadipate pathway (all branches)
muconolactone → beta-ketoadipate-enol-lactone
protocatechuic acid → 3-carboxy-cis,cis-muconate
3-carboxy-cis,cis-muconate → 2-carboxy-5-oxo-2,5-dihydrofuran-2-acetate
3-carboxy-cis,cis-muconate cycloisomerase
2-carboxy-5-oxo-2,5-dihydrofuran-2-acetate → 3-oxoadipate enol lactone
3-oxoadipate enol lactone → beta-ketoadipate
beta-ketoadipate-enol-lactone → beta-ketoadipate
This file is JSON-LD based on BioPAX Level 3 naming conventions. It is NOT a standards-compliant BioPAX OWL/RDF document. eLignin-specific extensions (elignin_id, connections, genes, …) are mapped to the http://www.elignindatabase.com/ontology# namespace. To convert to canonical BioPAX RDF/XML use pybiopax or a compatible RDF serialiser.